Air date: 2000-10-04

Runtime: 44 min

Stardate: 54014.4 - Partially transformed into Borg drones, Janeway, Tuvok, and Torres run a covert operation on board a Borg ship to infect the collective with a virus that will free subdued individuals from the hive's control.

Air date: 2000-10-11

Runtime: 44 min

Stardate: 54129.4 - A key Borg component in Seven's brain begins shutting down, leading to the possibility that she may be facing the equivalent of a terminal illness.

Air date: 2000-10-18

Runtime: 44 min

Stardate: 54058.6 - Torres and Paris' relationship takes a twist on the eve of a shuttle racing event Paris has entered, celebrating the anniversary of a peace treaty in a former war zone.

Air date: 2000-10-25

Runtime: 44 min

Stardate: 54090.4 - An investigation of mysterious attacks on members of the crew uncovers a buried plot involving Tuvok and a Maquis fanatic.

Air date: 2000-11-01

Runtime: 44 min

Stardate: Unknown - The Doctor is abducted from Voyager and forced to work in a hospital where patients are treated based on their social status.

Air date: 2000-11-08

Runtime: 44 min

Stardate: 54208.3 - The Voyager crew receives a transmission from the Alpha Quadrant that contains an interactive holographic program of Lieutenant Barclay, who informs them that Starfleet has found Voyager a way home.

Air date: 2000-11-15

Runtime: 44 min

Stardate: 54283.3 - In a region of space where holograms are prohibited, the Doctor is forced to hide by transferring his program into Seven's mind, upon which he takes over control of her body.

Air date: 2000-11-22

Runtime: 44 min

Stardate: 54274.7 - Ensign Kim finds himself making the hard choices of mission commander when he agrees to help the crew of a ship in need.

Air date: 2000-11-29

Runtime: 45 min

Stardate: 54337.5 - Voyager answers a distress call from a Hirogen outpost – only to find carnage caused by holographic technology that Captain Janeway has given them.

Air date: 2000-11-29

Runtime: 40 min

Stardate: 54337.5 - Voyager secretly trails two Hirogen ships in pursuit of the renegade hologram ship. Iden, the band's self-appointed leader, begins showing signs of delusional behaviour when he considers himself as the 'saviour of his people', and believes that his people will worship him as a God in their new settlement. With Voyager and the Hirogen ships trailing close behind, the Doctor and Torres must find a way to disable the ships and the holograms before they come under attack from the Hirogen, and before Iden can execute his plan.

Air date: 2001-01-17

Runtime: 44 min

Stardate: Unknown - A spatial anomaly divides Voyager into various time frames of the past and future, leaving Chakotay as the only person who may be able to put the pieces back together.

Air date: 2001-01-24

Runtime: 44 min

Stardate: 54452.6 - When B'Elanna learns she is pregnant, she tries to proactively repress her child's Klingon heritage on the basis of her own troubled past.

Air date: 2001-01-31

Runtime: 44 min

Stardate: 54474.6 - When Voyager provides emergency transportation for alien prisoners sentenced to die, a medical procedure unexpectedly and radically changes the values and temperament of one of the prisoners.

Air date: 2001-02-07

Runtime: 44 min

Stardate: 54518.2 - The captain of a Klingon ship on a generational holy mission believes Torres' unborn child may lead them to a new era of enlightenment.

Air date: 2001-02-14

Runtime: 44 min

Stardate: 54553.4 - Voyager is pulled into a barren spatial void where survival is based on preying upon others.

Air date: 2001-02-21

Runtime: 44 min

Stardate: 54584.3 - The Voyager crew is abducted to an alien world, where their memories are altered and they are dropped into the large population of an industrial labor force.

Air date: 2001-02-28

Runtime: 44 min

Stardate: 54622.4 - It's up to Chakotay, Kim, and the Doctor to liberate the Voyager crew and help uncover a conspiracy of illegal labor practices.

Air date: 2001-03-07

Runtime: 44 min

Stardate: Unknown - Seven of Nine runs a series of holodeck simulations to explore her untapped emotions.

Air date: 2001-04-11

Runtime: 44 min

Stardate: 54704.5 - Q comes to Voyager and asks Janeway to help him teach lessons of responsibility to his troublesome son.

Air date: 2001-04-18

Runtime: 44 min

Stardate: 54732.3 - When the Doctor arranges to have his recently completed holodeck novel published in the Alpha Quadrant, certain aspects of the story hit too close to home among his shipmates.

Air date: 2001-04-25

Runtime: 44 min

Stardate: 54775.4 - The Voyager crew, on a mission to track down a historic Earth probe designed to contact intelligent life, finds the probe had indeed crossed paths with another civilization, but with catastrophic results.

Air date: 2001-05-02

Runtime: 44 min

Stardate: 54817.5 - Chakotay and Seven find themselves trapped with a primitive culture that is separated from the rest of its world by an energy field designed to protect them.

Air date: 2001-05-09

Runtime: 44 min

Stardate: 54868.6 - Neelix finds he must make hard choices when he becomes involved in the struggle of Talaxian refugees whose home in an asteroid belt is threatened by alien miners.

Air date: 2001-05-16

Runtime: 44 min

Stardate: 54890.7 - The Doctor is forced to carry out a secret mission where he must impersonate members of the Voyager crew.

Air date: 2001-05-23

Runtime: 86 min

Stardate: 54973.4 - Twenty-six years in the future, a regretful Admiral Janeway hatches an audacious plan to bring Voyager home sooner, rather than have it spend an additional sixteen years making its journey.